Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.03□□□□□ -0.96
Ubr4A2AN08 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.03□□□□□ -0.96
Ubr4A2AN08 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.03□□□□□ -0.96
Ubr4A2AN08 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Gm6912-201ENSMUST00000117218 544 ntBASIC9.03□□□□□ -0.96
Ubr4A2AN08 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
Ubr4A2AN08 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Gm37805-201ENSMUST00000192612 1094 ntBASIC9.03□□□□□ -0.96
Ubr4A2AN08 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ubr4A2AN08 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ubr4A2AN08 Gm7222-201ENSMUST00000117512 906 ntBASIC9.02□□□□□ -0.96
Ubr4A2AN08 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC9.02□□□□□ -0.96
Ubr4A2AN08 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ubr4A2AN08 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Gm22175-201ENSMUST00000175007 78 ntBASIC9.02□□□□□ -0.97
Ubr4A2AN08 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.02□□□□□ -0.97
Ubr4A2AN08 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ubr4A2AN08 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.01□□□□□ -0.97
Ubr4A2AN08 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Gm27622-201ENSMUST00000183779 60 ntBASIC9.01□□□□□ -0.97
Ubr4A2AN08 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.01□□□□□ -0.97
Ubr4A2AN08 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Gm25948-201ENSMUST00000175334 112 ntBASIC9.01□□□□□ -0.97
Ubr4A2AN08 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Ubr4A2AN08 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC9□□□□□ -0.97
Ubr4A2AN08 Rbfox2-207ENSMUST00000227533 1041 ntBASIC9□□□□□ -0.97
Ubr4A2AN08 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC9□□□□□ -0.97
Ubr4A2AN08 Gm11873-201ENSMUST00000117877 1304 ntBASIC9□□□□□ -0.97
Ubr4A2AN08 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9□□□□□ -0.97
Ubr4A2AN08 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms