Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.57■□□□□ 0.08
Smim17A0A504 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.57■□□□□ 0.08
Smim17A0A504 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.57■□□□□ 0.08
Smim17A0A504 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.57■□□□□ 0.08
Smim17A0A504 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Smim17A0A504 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.57■□□□□ 0.08
Smim17A0A504 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smim17A0A504 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.56■□□□□ 0.08
Smim17A0A504 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Smim17A0A504 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.56■□□□□ 0.08
Smim17A0A504 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Smim17A0A504 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
Smim17A0A504 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.56■□□□□ 0.08
Smim17A0A504 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.56■□□□□ 0.08
Smim17A0A504 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Smim17A0A504 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.56■□□□□ 0.08
Smim17A0A504 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Smim17A0A504 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.56■□□□□ 0.08
Smim17A0A504 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smim17A0A504 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smim17A0A504 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.55■□□□□ 0.08
Smim17A0A504 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Smim17A0A504 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.55■□□□□ 0.08
Smim17A0A504 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.55■□□□□ 0.08
Smim17A0A504 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.55■□□□□ 0.08
Smim17A0A504 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Smim17A0A504 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smim17A0A504 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Smim17A0A504 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim17A0A504 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim17A0A504 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim17A0A504 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.54■□□□□ 0.08
Smim17A0A504 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smim17A0A504 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Smim17A0A504 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim17A0A504 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smim17A0A504 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim17A0A504 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim17A0A504 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smim17A0A504 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smim17A0A504 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms