Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trav13n-4A0A0G2JG01 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm8969-201ENSMUST00000199694 526 ntBASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm43799-201ENSMUST00000201845 579 ntBASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav13n-4A0A0G2JG01 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm6433-201ENSMUST00000118634 875 ntBASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Mtag2-201ENSMUST00000058665 714 ntBASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav13n-4A0A0G2JG01 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms