Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm6433-201ENSMUST00000118634 875 ntBASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm9731-201ENSMUST00000209480 747 ntBASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm7889-201ENSMUST00000185591 958 ntBASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm9987-201ENSMUST00000069768 567 ntBASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm13836-201ENSMUST00000121159 501 ntBASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm7791-201ENSMUST00000219066 539 ntBASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv9-3A0A0B4J1J5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Gm17661-201ENSMUST00000170317 270 ntBASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.2□□□□□ -0.14
Ighv9-3A0A0B4J1J5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms