Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.02□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-52A0A0A6YXC3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-52A0A0A6YXC3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Mir6982-201ENSMUST00000184354 68 ntBASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.02□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gm37519-201ENSMUST00000191687 2210 ntBASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gm43808-201ENSMUST00000202534 2065 ntBASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gm20472-201ENSMUST00000174403 1240 ntBASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gm7791-201ENSMUST00000219066 539 ntBASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv1-52A0A0A6YXC3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms