Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav17A0A075B655 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.62□□□□□ -0.23
Trav17A0A075B655 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Gm10033-202ENSMUST00000211874 928 ntBASIC13.62□□□□□ -0.23
Trav17A0A075B655 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.62□□□□□ -0.23
Trav17A0A075B655 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav17A0A075B655 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.62□□□□□ -0.23
Trav17A0A075B655 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Gm13401-201ENSMUST00000117074 291 ntBASIC13.61□□□□□ -0.23
Trav17A0A075B655 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Mir2861-201ENSMUST00000175539 82 ntBASIC13.61□□□□□ -0.23
Trav17A0A075B655 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.61□□□□□ -0.23
Trav17A0A075B655 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav17A0A075B655 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Flg-201ENSMUST00000050758 1488 ntBASIC13.6□□□□□ -0.23
Trav17A0A075B655 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav17A0A075B655 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Gm7291-201ENSMUST00000199147 382 ntBASIC13.59□□□□□ -0.23
Trav17A0A075B655 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav17A0A075B655 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms