Protein–RNA interactions for Protein: A0A075B647

Trav9-2, T cell receptor alpha variable 9-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-2A0A075B647 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav9-2A0A075B647 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav9-2A0A075B647 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-2A0A075B647 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-2A0A075B647 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav9-2A0A075B647 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Gm37055-201ENSMUST00000191866 133 ntBASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav9-2A0A075B647 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Gm3375-201ENSMUST00000203929 796 ntBASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Gm10252-201ENSMUST00000209541 832 ntBASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9-2A0A075B647 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9-2A0A075B647 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9-2A0A075B647 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9-2A0A075B647 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9-2A0A075B647 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Odf3b-204ENSMUST00000227834 930 ntBASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9-2A0A075B647 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-2A0A075B647 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav9-2A0A075B647 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9-2A0A075B647 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-2A0A075B647 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-2A0A075B647 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-2A0A075B647 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav9-2A0A075B647 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-2A0A075B647 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms