Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav16d-dv11A0A075B617 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Mir7075-201ENSMUST00000184187 82 ntBASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trav16d-dv11A0A075B617 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav16d-dv11A0A075B617 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm8493-201ENSMUST00000196881 489 ntBASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16d-dv11A0A075B617 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16d-dv11A0A075B617 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms