Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.05□□□□□ -0.16
Trav7n-5A0A075B604 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Gm16061-201ENSMUST00000122167 857 ntBASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7n-5A0A075B604 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7n-5A0A075B604 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7n-5A0A075B604 Gm18959-201ENSMUST00000208954 655 ntBASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7n-5A0A075B604 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Rarb-207ENSMUST00000225921 2756 ntBASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Gm18958-201ENSMUST00000174258 762 ntBASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Mir7071-201ENSMUST00000184847 69 ntBASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Gm7889-201ENSMUST00000185591 958 ntBASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7n-5A0A075B604 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav7n-5A0A075B604 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7n-5A0A075B604 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7n-5A0A075B604 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7n-5A0A075B604 Gm37811-201ENSMUST00000192416 2601 ntBASIC14□□□□□ -0.17
Trav7n-5A0A075B604 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7n-5A0A075B604 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7n-5A0A075B604 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms