Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 AV356131-201ENSMUST00000206201 750 ntBASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-6A0A075B603 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-6A0A075B603 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav6-6A0A075B603 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-6A0A075B603 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav6-6A0A075B603 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav6-6A0A075B603 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-6A0A075B603 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-6A0A075B603 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-6A0A075B603 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Gm7290-201ENSMUST00000104990 617 ntBASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Gm12918-201ENSMUST00000120234 636 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms