Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RN7SL149P-201ENST00000465197 281 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX3Q99909 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX3Q99909 RN7SL849P-201ENST00000485236 295 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 RFPL4AP3-201ENST00000515267 345 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AC100854.1-201ENST00000520351 341 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 RBMS2P1-201ENST00000525031 1226 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX3Q99909 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX3Q99909 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 MIR378H-201ENST00000579966 83 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX3Q99909 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX3Q99909 SIGLEC31P-201ENST00000594237 551 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AC092032.1-201ENST00000603090 165 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AL591222.2-201ENST00000604443 754 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 LSM1P2-201ENST00000604911 322 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AL355333.1-201ENST00000605632 279 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX3Q99909 OR8G7P-201ENST00000616658 848 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 U1.34-201ENST00000618578 162 ntBASIC5.75□□□□□ -1.49
SSX3Q99909 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX3Q99909 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX3Q99909 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX3Q99909 AC011503.2-201ENST00000594230 1500 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 UGT2B27P-201ENST00000505092 1620 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX3Q99909 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
SSX3Q99909 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 OR11H13P-201ENST00000359695 979 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 RPL12P1-201ENST00000374520 498 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 U3.23-201ENST00000391132 200 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 RNU1-56P-201ENST00000391303 164 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SSX3Q99909 RN7SKP268-201ENST00000411107 316 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 RNA5SP280-201ENST00000411230 115 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 UQCRHP1-204ENST00000424609 274 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 PUDPP2-201ENST00000431423 643 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 PMS2P9-201ENST00000441237 515 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 AL354872.1-201ENST00000456361 967 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 AC066616.1-201ENST00000486795 413 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 AL135933.1-201ENST00000498657 802 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX3Q99909 AC026782.2-201ENST00000510845 636 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC5.74□□□□□ -1.49
SSX3Q99909 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 PHBP2-201ENST00000532859 806 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 MIR4800-201ENST00000537353 80 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX3Q99909 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX3Q99909 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 AL136097.3-201ENST00000611097 505 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX3Q99909 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SSX3Q99909 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SSX3Q99909 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 AL356361.1-201ENST00000400943 1459 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 MKI67P1-201ENST00000604297 1460 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 CR382285.2-201ENST00000624662 1495 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 AC093909.5-201ENST00000621839 1799 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX3Q99909 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX3Q99909 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SSX3Q99909 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX3Q99909 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX3Q99909 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX3Q99909 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX3Q99909 KARSP2-201ENST00000415696 1639 ntBASIC5.74□□□□□ -1.49
SSX3Q99909 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
SSX3Q99909 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms