Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL096803.1-201ENST00000456921 1021 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 NMNAT1P3-201ENST00000457517 888 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 PPP1R2P6-201ENST00000478565 588 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CL1P78423 AC105391.1-201ENST00000503155 1045 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AC021220.1-201ENST00000507445 630 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CL1P78423 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CL1P78423 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CL1P78423 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CL1P78423 AP006587.5-201ENST00000532033 739 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CL1P78423 AL132640.1-201ENST00000559594 619 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CL1P78423 SNORA70D-201ENST00000578836 135 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CL1P78423 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 FCGR1CP-201ENST00000579737 1127 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 FAM60CP-201ENST00000591086 664 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AC020914.7-201ENST00000594477 545 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AP005131.7-201ENST00000610087 611 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AC245407.2-201ENST00000614199 451 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 AC140479.4-205ENST00000636339 820 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 API5P1-201ENST00000424316 1510 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 OR2A3P-202ENST00000641249 1776 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CX3CL1P78423 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CL1P78423 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.46□□□□□ -1.54
CX3CL1P78423 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CL1P78423 AC009779.8-201ENST00000641684 4384 ntBASIC5.46□□□□□ -1.54
CX3CL1P78423 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CX3CL1P78423 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 SNX18P3-202ENST00000565670 1750 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AC007114.2-201ENST00000576014 4281 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.45□□□□□ -1.54
CX3CL1P78423 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.45□□□□□ -1.54
CX3CL1P78423 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 RNA5SP429-201ENST00000363688 109 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 PPIAP26-201ENST00000377951 522 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 MIR99A-201ENST00000384906 81 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 AL139039.2-201ENST00000407436 479 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AL353626.3-201ENST00000413399 657 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 RCC2P2-201ENST00000422174 918 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 NDUFA5P1-201ENST00000433858 341 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AC027124.1-201ENST00000440852 466 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.45□□□□□ -1.54
CX3CL1P78423 RPL31P53-201ENST00000457065 348 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AC083806.1-201ENST00000468934 316 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 RPL7AP30-201ENST00000482859 796 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 RN7SL849P-201ENST00000485236 295 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AC073648.3-201ENST00000504939 925 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.45□□□□□ -1.54
CX3CL1P78423 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.45□□□□□ -1.54
CX3CL1P78423 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.45□□□□□ -1.54
CX3CL1P78423 AC069240.2-201ENST00000550242 609 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AL591767.3-201ENST00000554632 525 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 DPPA3P2-202ENST00000557188 1219 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 RN7SL131P-201ENST00000579043 256 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.45□□□□□ -1.54
CX3CL1P78423 AC004908.1-201ENST00000606572 541 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AC007204.1-201ENST00000621794 555 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 AC073592.7-201ENST00000623659 507 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AP003108.4-201ENST00000623917 878 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AC004808.2-201ENST00000627965 773 ntBASIC5.45□□□□□ -1.54
CX3CL1P78423 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.45□□□□□ -1.54
CX3CL1P78423 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.45□□□□□ -1.54
CX3CL1P78423 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CL1P78423 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms