Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL133260.1-201ENST00000405720 405 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AL139184.1-202ENST00000422303 222 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 LINC00328-2P-201ENST00000436585 219 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 RN7SL705P-201ENST00000481678 294 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AC091849.1-201ENST00000509920 121 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AL591767.3-201ENST00000554632 525 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AC115989.2-201ENST00000578640 563 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 RPL29P33-201ENST00000587474 316 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AC005828.7-201ENST00000607331 556 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AC068726.1-201ENST00000610993 341 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AC131009.3-201ENST00000621809 287 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 AC061999.1-201ENST00000624454 177 ntBASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA3F8WFD2 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 PPBPP2-201ENST00000513150 1362 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 OR56A4-201ENST00000330728 1209 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 RNU1-24P-201ENST00000364285 165 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 RNA5SP140-201ENST00000364524 92 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AL590635.1-201ENST00000406314 586 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AL663061.1-201ENST00000416625 580 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC244033.1-201ENST00000426826 870 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC091390.2-201ENST00000432573 374 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 PCNPP2-201ENST00000441651 455 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 GAPDHP37-201ENST00000442317 968 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 RN7SL168P-201ENST00000463821 279 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC099340.1-201ENST00000475247 599 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 RPL7AP23-201ENST00000482625 776 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC024405.1-201ENST00000532521 1042 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC005519.1-201ENST00000554490 601 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC012368.3-201ENST00000604190 219 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC015849.6-201ENST00000605454 474 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC079414.3-201ENST00000612986 1090 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC069542.2-201ENST00000624816 216 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AL589993.1-201ENST00000407450 2524 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC009237.3-203ENST00000442128 3551 ntBASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NPIPA3F8WFD2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
NPIPA3F8WFD2 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NPIPA3F8WFD2 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
NPIPA3F8WFD2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NPIPA3F8WFD2 AC127070.3-201ENST00000503695 3263 ntBASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NPIPA3F8WFD2 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms