Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC9.11□□□□□ -0.95
CCDC27Q2M243 MIR378H-201ENST00000579966 83 ntBASIC9.11□□□□□ -0.95
CCDC27Q2M243 RN7SL339P-201ENST00000580597 296 ntBASIC9.11□□□□□ -0.95
CCDC27Q2M243 RN7SL657P-201ENST00000582431 293 ntBASIC9.11□□□□□ -0.95
CCDC27Q2M243 AC090774.2-201ENST00000584708 322 ntBASIC9.11□□□□□ -0.95
CCDC27Q2M243 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CCDC27Q2M243 AC068620.3-201ENST00000602749 560 ntBASIC9.11□□□□□ -0.95
CCDC27Q2M243 AC024085.1-201ENST00000604299 432 ntBASIC9.11□□□□□ -0.95
CCDC27Q2M243 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC9.11□□□□□ -0.95
CCDC27Q2M243 AC015849.2-201ENST00000605738 409 ntBASIC9.11□□□□□ -0.95
CCDC27Q2M243 AP003108.4-201ENST00000623917 878 ntBASIC9.11□□□□□ -0.95
CCDC27Q2M243 AC004808.1-201ENST00000627671 721 ntBASIC9.11□□□□□ -0.95
CCDC27Q2M243 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CCDC27Q2M243 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC9.11□□□□□ -0.95
CCDC27Q2M243 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC9.11□□□□□ -0.95
CCDC27Q2M243 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
CCDC27Q2M243 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CCDC27Q2M243 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CCDC27Q2M243 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
CCDC27Q2M243 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CCDC27Q2M243 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 MIR99A-201ENST00000384906 81 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 MIR122-201ENST00000385044 85 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 RNA5SP231-201ENST00000410496 138 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 MTCO2P17-201ENST00000424336 677 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AL592114.2-201ENST00000440142 532 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AL158214.1-201ENST00000444423 404 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC093770.1-201ENST00000511559 571 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 OR9L1P-201ENST00000529493 933 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC103855.4-201ENST00000533158 265 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC007537.1-201ENST00000539347 327 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC011447.2-201ENST00000592921 283 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC023206.1-201ENST00000605824 298 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC026951.2-201ENST00000613847 241 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 MIR1264-201ENST00000616374 69 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AC068880.4-201ENST00000623082 495 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 RPSAP68-201ENST00000625020 438 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 MIR665-201ENST00000635949 72 ntBASIC9.1□□□□□ -0.95
CCDC27Q2M243 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
CCDC27Q2M243 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CCDC27Q2M243 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
CCDC27Q2M243 ZNF101P1-201ENST00000435701 1720 ntBASIC9.09□□□□□ -0.95
CCDC27Q2M243 AC020658.2-201ENST00000559030 4020 ntBASIC9.09□□□□□ -0.95
CCDC27Q2M243 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 MTCO1P4-201ENST00000520516 1409 ntBASIC9.09□□□□□ -0.95
CCDC27Q2M243 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 EEF1GP6-201ENST00000402309 905 ntBASIC9.09□□□□□ -0.95
CCDC27Q2M243 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CCDC27Q2M243 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CCDC27Q2M243 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CCDC27Q2M243 GAPDHP75-201ENST00000433910 943 ntBASIC9.09□□□□□ -0.95
CCDC27Q2M243 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC9.09□□□□□ -0.95
CCDC27Q2M243 CEACAMP5-201ENST00000448037 961 ntBASIC9.09□□□□□ -0.95
CCDC27Q2M243 GAPDHP16-201ENST00000448152 962 ntBASIC9.09□□□□□ -0.95
CCDC27Q2M243 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms