Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7□□□□□ -1.29
APOEP02649 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7□□□□□ -1.29
APOEP02649 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
APOEP02649 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7□□□□□ -1.29
APOEP02649 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7□□□□□ -1.29
APOEP02649 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.99□□□□□ -1.29
APOEP02649 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.99□□□□□ -1.29
APOEP02649 AC093278.2-201ENST00000564956 2485 ntBASIC6.99□□□□□ -1.29
APOEP02649 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
APOEP02649 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
APOEP02649 ARSFP1-201ENST00000398758 477 ntBASIC6.99□□□□□ -1.29
APOEP02649 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.99□□□□□ -1.29
APOEP02649 CDC42P6-201ENST00000421246 576 ntBASIC6.99□□□□□ -1.29
APOEP02649 AL022324.2-201ENST00000434827 780 ntBASIC6.99□□□□□ -1.29
APOEP02649 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.99□□□□□ -1.29
APOEP02649 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.99□□□□□ -1.29
APOEP02649 RPSAP24-201ENST00000461543 873 ntBASIC6.99□□□□□ -1.29
APOEP02649 RN7SL502P-201ENST00000481857 290 ntBASIC6.99□□□□□ -1.29
APOEP02649 AC074386.1-206ENST00000487102 761 ntBASIC6.99□□□□□ -1.29
APOEP02649 AC063943.2-201ENST00000495697 534 ntBASIC6.99□□□□□ -1.29
APOEP02649 AC139713.1-202ENST00000512366 460 ntBASIC6.99□□□□□ -1.29
APOEP02649 RN7SKP196-201ENST00000516267 345 ntBASIC6.99□□□□□ -1.29
APOEP02649 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.99□□□□□ -1.29
APOEP02649 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.99□□□□□ -1.29
APOEP02649 RPL7AP69-201ENST00000595306 806 ntBASIC6.99□□□□□ -1.29
APOEP02649 CYCSP1-201ENST00000604815 315 ntBASIC6.99□□□□□ -1.29
APOEP02649 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.99□□□□□ -1.29
APOEP02649 AC005514.1-201ENST00000623521 208 ntBASIC6.99□□□□□ -1.29
APOEP02649 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.99□□□□□ -1.29
APOEP02649 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.99□□□□□ -1.29
APOEP02649 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 AC062029.1-202ENST00000606164 3651 ntBASIC6.99□□□□□ -1.29
APOEP02649 AL136531.3-201ENST00000624378 3658 ntBASIC6.99□□□□□ -1.29
APOEP02649 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.99□□□□□ -1.29
APOEP02649 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
APOEP02649 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
APOEP02649 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.99□□□□□ -1.29
APOEP02649 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.99□□□□□ -1.29
APOEP02649 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 OFD1P17-201ENST00000437639 3018 ntBASIC6.98□□□□□ -1.29
APOEP02649 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
APOEP02649 AC079949.2-201ENST00000617117 2933 ntBASIC6.98□□□□□ -1.29
APOEP02649 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
APOEP02649 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.98□□□□□ -1.29
APOEP02649 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.98□□□□□ -1.29
APOEP02649 AC096992.2-201ENST00000609553 1684 ntBASIC6.98□□□□□ -1.29
APOEP02649 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
APOEP02649 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
APOEP02649 AC026310.1-201ENST00000396004 378 ntBASIC6.98□□□□□ -1.29
APOEP02649 FDPSP5-201ENST00000399474 1057 ntBASIC6.98□□□□□ -1.29
APOEP02649 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
APOEP02649 RPS7P12-201ENST00000422385 582 ntBASIC6.98□□□□□ -1.29
APOEP02649 MRPS21P3-201ENST00000436696 262 ntBASIC6.98□□□□□ -1.29
APOEP02649 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.98□□□□□ -1.29
APOEP02649 AL121578.2-201ENST00000448797 447 ntBASIC6.98□□□□□ -1.29
APOEP02649 RPS3AP49-201ENST00000472161 790 ntBASIC6.98□□□□□ -1.29
APOEP02649 AC068522.1-201ENST00000482895 345 ntBASIC6.98□□□□□ -1.29
APOEP02649 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
APOEP02649 AL390198.2-201ENST00000510553 222 ntBASIC6.98□□□□□ -1.29
APOEP02649 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.98□□□□□ -1.29
APOEP02649 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.98□□□□□ -1.29
APOEP02649 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.98□□□□□ -1.29
APOEP02649 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.98□□□□□ -1.29
APOEP02649 OR4C49P-201ENST00000563891 900 ntBASIC6.98□□□□□ -1.29
APOEP02649 AC091304.4-201ENST00000565703 620 ntBASIC6.98□□□□□ -1.29
APOEP02649 ANP32BP1-202ENST00000568553 737 ntBASIC6.98□□□□□ -1.29
APOEP02649 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.98□□□□□ -1.29
APOEP02649 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.98□□□□□ -1.29
APOEP02649 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 MIR6849-201ENST00000618543 69 ntBASIC6.98□□□□□ -1.29
APOEP02649 OR1N1-202ENST00000619659 939 ntBASIC6.98□□□□□ -1.29
APOEP02649 AC005899.6-201ENST00000620729 297 ntBASIC6.98□□□□□ -1.29
APOEP02649 AL035425.4-201ENST00000624509 1063 ntBASIC6.98□□□□□ -1.29
APOEP02649 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
APOEP02649 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.98□□□□□ -1.29
APOEP02649 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
APOEP02649 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.98□□□□□ -1.29
APOEP02649 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.98□□□□□ -1.29
APOEP02649 MKI67P1-201ENST00000604297 1460 ntBASIC6.98□□□□□ -1.29
APOEP02649 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
APOEP02649 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms