Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNORA16A-202ENST00000628458 135 ntBASIC6.09□□□□□ -1.43
SPTA1P02549 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SPTA1P02549 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SPTA1P02549 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.44
SPTA1P02549 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SPTA1P02549 Z83820.1-201ENST00000456978 1499 ntBASIC6.09□□□□□ -1.44
SPTA1P02549 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
SPTA1P02549 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.44
SPTA1P02549 IST1-208ENST00000535424 4082 ntTSL 5 BASIC6.09□□□□□ -1.44
SPTA1P02549 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 EXOC7P1-201ENST00000509881 2059 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 RNA5SP346-201ENST00000363541 121 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SPTA1P02549 AC017035.1-201ENST00000411999 1115 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 AC027801.3-201ENST00000515049 698 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 RNA5SP271-201ENST00000516700 88 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 OR4A46P-201ENST00000527255 933 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.08□□□□□ -1.44
SPTA1P02549 AC090115.2-201ENST00000548060 883 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 AC012557.1-201ENST00000607115 611 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 AC025162.2-201ENST00000619602 560 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 AC009237.3-203ENST00000442128 3551 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 AC008627.1-201ENST00000517511 1704 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 AC010886.1-201ENST00000437380 2869 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.08□□□□□ -1.44
SPTA1P02549 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
SPTA1P02549 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 AC008555.1-201ENST00000561778 2757 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SPTA1P02549 AC092724.1-201ENST00000624623 3397 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.08□□□□□ -1.44
SPTA1P02549 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.08□□□□□ -1.44
SPTA1P02549 AL121916.1-201ENST00000429405 308 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 AL627308.1-201ENST00000435693 821 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SPTA1P02549 HSPD1P4-201ENST00000547203 1702 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 AC004232.2-201ENST00000574245 821 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 AC073488.6-201ENST00000632293 754 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.08□□□□□ -1.44
SPTA1P02549 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SPTA1P02549 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SPTA1P02549 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SPTA1P02549 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SPTA1P02549 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 HSP90AB7P-201ENST00000450068 2454 ntBASIC6.08□□□□□ -1.44
SPTA1P02549 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPTA1P02549 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SPTA1P02549 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.07□□□□□ -1.44
SPTA1P02549 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 UBTFL11-201ENST00000428234 2252 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 RPL17P17-201ENST00000419491 557 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SPTA1P02549 AC112492.2-201ENST00000432774 1030 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 OR2L9P-201ENST00000444456 913 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 AL450996.1-201ENST00000445574 1202 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 RPL31P15-201ENST00000449770 338 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 CFL1P4-201ENST00000451536 498 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.07□□□□□ -1.44
SPTA1P02549 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.07□□□□□ -1.44
SPTA1P02549 AC135626.1-201ENST00000556983 435 ntBASIC6.07□□□□□ -1.44
SPTA1P02549 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.07□□□□□ -1.44
SPTA1P02549 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.07□□□□□ -1.44
SPTA1P02549 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC6.07□□□□□ -1.44
SPTA1P02549 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.07□□□□□ -1.44
SPTA1P02549 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
SPTA1P02549 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC6.07□□□□□ -1.44
SPTA1P02549 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SPTA1P02549 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPTA1P02549 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.07□□□□□ -1.44
SPTA1P02549 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms