Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 OR52S1P-201ENST00000427016 937 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AL451136.1-201ENST00000435399 325 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 MRPS21P3-201ENST00000436696 262 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AC239800.1-201ENST00000442049 719 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AL139156.3-201ENST00000454802 394 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 RPS26P11-201ENST00000463445 348 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 RPS26P6-201ENST00000475156 348 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 RPS16P9-201ENST00000477220 427 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 RPS26P24-201ENST00000497656 331 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 MTCYBP44-201ENST00000514835 823 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 RNU6-964P-201ENST00000516524 69 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 IGKV1D-32-201ENST00000517449 318 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AC021820.1-201ENST00000525564 808 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AL109628.1-201ENST00000556877 366 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 MIR5682-201ENST00000584864 76 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AP000577.1-201ENST00000624366 878 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 TNPO1P2-201ENST00000426249 2665 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 PARP4P1-201ENST00000435945 2337 ntBASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDD3Q9Y3P4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 OR10D1P-201ENST00000355343 936 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 RNA5SP176-201ENST00000390956 110 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 CYCSP17-201ENST00000407870 315 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC024937.2-201ENST00000411669 1242 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC009362.1-201ENST00000427253 406 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC027124.1-201ENST00000440852 466 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 ST13P21-201ENST00000453250 1098 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC092824.1-201ENST00000483524 576 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AF305872.1-201ENST00000485217 471 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 RPL21P42-201ENST00000488408 464 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 SNORA58-201ENST00000505219 137 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC139713.1-202ENST00000512366 460 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 RNA5SP278-201ENST00000517055 102 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC069240.2-201ENST00000550242 609 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AL132640.1-201ENST00000559594 619 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 RN7SL199P-201ENST00000578752 281 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 RN7SL656P-201ENST00000579044 281 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 RN7SL404P-201ENST00000582421 281 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 WDR45BP1-201ENST00000583470 1029 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC024085.1-201ENST00000604299 432 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC139792.1-201ENST00000607051 647 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC012511.1-201ENST00000608140 449 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC010333.3-201ENST00000615100 402 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 AC005753.1-201ENST00000623837 618 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 SNORA16A-202ENST00000628458 135 ntBASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDD3Q9Y3P4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms