Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL079341.1-201ENST00000404701 1207 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AL023284.3-201ENST00000407767 334 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC083855.1-201ENST00000440041 258 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 RPSAP24-201ENST00000461543 873 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC137549.1-201ENST00000514243 533 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC096661.1-201ENST00000515870 822 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 SCARNA5-201ENST00000516201 276 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 ANP32BP1-202ENST00000568553 737 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC100832.2-201ENST00000582080 776 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 SNORD96A-201ENST00000606577 79 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC004241.2-201ENST00000614562 444 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC009283.1-201ENST00000615852 645 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AL121936.2-201ENST00000641935 662 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC126474.2-201ENST00000623268 1750 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 AC092701.1-201ENST00000623627 1551 ntBASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RSPO3Q9BXY4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC022613.3-201ENST00000560740 1346 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 RNA5SP321-201ENST00000362722 111 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 RPL5P20-201ENST00000403848 896 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 E2F6P1-201ENST00000428850 745 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 CHCHD4P5-201ENST00000436684 427 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 E2F6P3-201ENST00000441743 743 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AL845321.1-201ENST00000444603 348 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 RBMY2EP-202ENST00000456360 940 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC099340.1-201ENST00000475247 599 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC117394.1-201ENST00000477323 567 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC093878.1-201ENST00000515630 432 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC012065.3-201ENST00000602736 439 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AL121985.3-201ENST00000620690 523 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC117503.3-201ENST00000623811 601 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 AC140479.4-205ENST00000636339 820 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 VN2R1P-201ENST00000449668 1743 ntBASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RSPO3Q9BXY4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RSPO3Q9BXY4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms