Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 CCDC58P1-201ENST00000578567 430 ntBASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 AL034417.4-202ENST00000642135 2236 ntBASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 AL121835.2-201ENST00000624253 3502 ntBASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM48Q8IWZ4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 SALL1P1-201ENST00000438101 3837 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC067942.1-201ENST00000488045 1493 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 RNA5SP355-201ENST00000365317 135 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC090114.1-201ENST00000393266 448 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AL161742.1-201ENST00000418154 584 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 GAPDHP51-201ENST00000426454 1000 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 CLNS1AP1-201ENST00000435954 682 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC013410.1-201ENST00000436223 1232 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 MTND2P21-201ENST00000436242 1042 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AL731892.1-201ENST00000437364 1192 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC006326.1-201ENST00000445465 787 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AP002345.1-201ENST00000456493 928 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 RPL32P14-201ENST00000463196 378 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 RN7SL180P-201ENST00000466769 294 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 SUMO2P5-201ENST00000506790 245 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 CHCHD2P7-201ENST00000508008 452 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC117522.2-201ENST00000510049 657 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 RNU6-491P-201ENST00000516099 110 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 CASP1P2-201ENST00000526830 1258 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 OR5M4P-201ENST00000529436 925 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 NDUFA3P2-201ENST00000531434 232 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 FAM30C-201ENST00000561158 410 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC023824.3-201ENST00000569003 562 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 RPSAP66-201ENST00000592196 606 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC011492.1-201ENST00000600023 315 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 VN1R81P-201ENST00000602085 372 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AL023806.2-201ENST00000603042 263 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC026741.1-201ENST00000605892 482 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC012510.1-201ENST00000607946 759 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AL157392.4-201ENST00000609756 345 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC096586.2-201ENST00000610260 441 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AL161931.1-201ENST00000612768 246 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AL137246.2-201ENST00000613439 662 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 CYCSP41-201ENST00000616920 296 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC017104.5-201ENST00000637647 639 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC132825.7-201ENST00000638744 335 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 AC104162.1-201ENST00000430831 2382 ntBASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM48Q8IWZ4 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms