Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HLA-DMAP28067 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DMAP28067 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DMAP28067 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC106872.6-201ENST00000514228 1346 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 FGG-204ENST00000405164 1539 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AL137058.3-201ENST00000624531 3099 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC079753.1-201ENST00000623243 3868 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 RNA5SP396-201ENST00000364834 120 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 RN7SKP186-201ENST00000365371 303 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 MIR152-201ENST00000385212 87 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 TAS2R2P-201ENST00000421146 910 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC130472.1-201ENST00000427885 309 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 RPL5P2-201ENST00000429598 854 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC000362.1-201ENST00000433725 425 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 RPL34P22-201ENST00000468193 318 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 TECRP2-201ENST00000503270 928 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 RPL17P3-201ENST00000605695 525 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 RN7SL760P-201ENST00000607344 270 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 MIR7848-201ENST00000617402 101 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 RNA5SP439-201ENST00000617595 124 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 OR7E161P-202ENST00000641994 1033 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AC010624.4-201ENST00000597606 1351 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 AL355488.2-201ENST00000609909 2850 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DMAP28067 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DMAP28067 SLC9B1P3-201ENST00000452667 1334 ntBASIC5.74□□□□□ -1.49
HLA-DMAP28067 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DMAP28067 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DMAP28067 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DMAP28067 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 AC140479.2-201ENST00000421567 3130 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 SAMM50P1-201ENST00000455403 1399 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DMAP28067 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DMAP28067 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DMAP28067 AL050335.1-201ENST00000396909 869 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 OR4F7P-201ENST00000402444 931 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 AL121835.1-201ENST00000404250 354 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 OR4F1P-201ENST00000405102 938 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 RN7SKP148-201ENST00000410179 275 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 PPIAP30-201ENST00000415473 519 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 OR4F2P-201ENST00000424047 938 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DMAP28067 CICP10-201ENST00000439497 198 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DMAP28067 RPL21P33-201ENST00000444831 484 ntBASIC5.73□□□□□ -1.49
HLA-DMAP28067 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DMAP28067 AL591379.2-201ENST00000450223 397 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms