Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PAICSP2-201ENST00000429118 1150 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 RPL23AP68-201ENST00000480924 445 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 RNU6-362P-201ENST00000516736 90 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC126323.4-201ENST00000566935 234 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC133552.4-201ENST00000576103 676 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 RPS27AP19-201ENST00000597285 458 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 FXYD6P1-201ENST00000604857 285 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC006328.2-201ENST00000623198 397 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AP003108.4-201ENST00000623917 878 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC012005.2-201ENST00000624333 397 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC061999.1-201ENST00000624454 177 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC140479.4-205ENST00000636339 820 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC005034.3-201ENST00000604845 1747 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AL117378.2-201ENST00000622916 1337 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 RN7SKP189-201ENST00000365042 330 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 RPL36P18-201ENST00000419316 318 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 YWHAZP5-201ENST00000419975 730 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC133965.1-201ENST00000452984 354 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 RPL7AP30-201ENST00000482859 796 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC068522.1-201ENST00000482895 345 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 RN7SL868P-201ENST00000485915 303 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 RWDD4P1-201ENST00000488019 565 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC105391.1-201ENST00000503155 1045 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 PHBP2-201ENST00000532859 806 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC011921.2-201ENST00000589465 152 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC024085.1-201ENST00000604299 432 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC006453.3-201ENST00000635891 377 ntBASIC6.65□□□□□ -1.34
ZNF549Q6P9A3 AC125603.4-201ENST00000621942 2699 ntBASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 AC022306.1-201ENST00000560489 1562 ntBASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.65□□□□□ -1.35
ZNF549Q6P9A3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms