Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CcsQ9WU84 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.34□□□□□ -0.27
CcsQ9WU84 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.34□□□□□ -0.27
CcsQ9WU84 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.34□□□□□ -0.27
CcsQ9WU84 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CcsQ9WU84 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CcsQ9WU84 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CcsQ9WU84 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.34□□□□□ -0.27
CcsQ9WU84 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CcsQ9WU84 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.34□□□□□ -0.27
CcsQ9WU84 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
CcsQ9WU84 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CcsQ9WU84 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
CcsQ9WU84 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
CcsQ9WU84 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CcsQ9WU84 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CcsQ9WU84 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CcsQ9WU84 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.33□□□□□ -0.28
CcsQ9WU84 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.33□□□□□ -0.28
CcsQ9WU84 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.33□□□□□ -0.28
CcsQ9WU84 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CcsQ9WU84 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CcsQ9WU84 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CcsQ9WU84 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.32□□□□□ -0.28
CcsQ9WU84 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CcsQ9WU84 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CcsQ9WU84 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CcsQ9WU84 Gm29257-201ENSMUST00000186115 639 ntBASIC13.32□□□□□ -0.28
CcsQ9WU84 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CcsQ9WU84 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.32□□□□□ -0.28
CcsQ9WU84 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.32□□□□□ -0.28
CcsQ9WU84 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcsQ9WU84 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.32□□□□□ -0.28
CcsQ9WU84 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.32□□□□□ -0.28
CcsQ9WU84 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.31□□□□□ -0.28
CcsQ9WU84 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.31□□□□□ -0.28
CcsQ9WU84 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CcsQ9WU84 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CcsQ9WU84 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CcsQ9WU84 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CcsQ9WU84 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.31□□□□□ -0.28
CcsQ9WU84 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CcsQ9WU84 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms