Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Ggps1Q9WTN0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.63
Ggps1Q9WTN0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.01■□□□□ 0.63
Ggps1Q9WTN0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19■□□□□ 0.63
Ggps1Q9WTN0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ggps1Q9WTN0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ggps1Q9WTN0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ggps1Q9WTN0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Gm18669-201ENSMUST00000216049 778 ntBASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ggps1Q9WTN0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Gm27000-201ENSMUST00000182943 842 ntBASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.97■□□□□ 0.63
Ggps1Q9WTN0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Gm27742-201ENSMUST00000184667 60 ntBASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ggps1Q9WTN0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Ggps1Q9WTN0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ggps1Q9WTN0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ggps1Q9WTN0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ggps1Q9WTN0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ggps1Q9WTN0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ggps1Q9WTN0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ggps1Q9WTN0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms