Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssu72Q9CY97 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssu72Q9CY97 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssu72Q9CY97 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ssu72Q9CY97 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Ssu72Q9CY97 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Gm26524-201ENSMUST00000192339 390 ntBASIC17.05■□□□□ 0.32
Ssu72Q9CY97 AV356131-201ENSMUST00000206201 750 ntBASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ssu72Q9CY97 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.04■□□□□ 0.32
Ssu72Q9CY97 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Gm6576-201ENSMUST00000169678 883 ntBASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Gm42642-201ENSMUST00000200683 355 ntBASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ssu72Q9CY97 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Gm10138-203ENSMUST00000206952 366 ntBASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Mtag2-201ENSMUST00000058665 714 ntBASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ssu72Q9CY97 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ssu72Q9CY97 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ssu72Q9CY97 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ssu72Q9CY97 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ssu72Q9CY97 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms