Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf135Q9CWS1 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Gm715-201ENSMUST00000117865 831 ntBASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf135Q9CWS1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf135Q9CWS1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf135Q9CWS1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf135Q9CWS1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.83■□□□□ 0.45
Rnf135Q9CWS1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf135Q9CWS1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf135Q9CWS1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf135Q9CWS1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf135Q9CWS1 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.83■□□□□ 0.45
Rnf135Q9CWS1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf135Q9CWS1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms