Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb1Q9CQ70 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb1Q9CQ70 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb1Q9CQ70 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb1Q9CQ70 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb1Q9CQ70 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
H2afb1Q9CQ70 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
H2afb1Q9CQ70 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb1Q9CQ70 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Gm12382-201ENSMUST00000122005 922 ntBASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.05□□□□□ -0.16
H2afb1Q9CQ70 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Gm37292-201ENSMUST00000192062 758 ntBASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb1Q9CQ70 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb1Q9CQ70 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
H2afb1Q9CQ70 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb1Q9CQ70 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb1Q9CQ70 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb1Q9CQ70 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb1Q9CQ70 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb1Q9CQ70 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.02□□□□□ -0.17
H2afb1Q9CQ70 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H2afb1Q9CQ70 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb1Q9CQ70 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
H2afb1Q9CQ70 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb1Q9CQ70 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms