Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.75■□□□□ 0.75
Smc1bQ920F6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc1bQ920F6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.74■□□□□ 0.75
Smc1bQ920F6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc1bQ920F6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.74■□□□□ 0.75
Smc1bQ920F6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Gm7153-201ENSMUST00000117092 455 ntBASIC19.73■□□□□ 0.75
Smc1bQ920F6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Gm17807-201ENSMUST00000186869 298 ntBASIC19.73■□□□□ 0.75
Smc1bQ920F6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.73■□□□□ 0.75
Smc1bQ920F6 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.73■□□□□ 0.75
Smc1bQ920F6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc1bQ920F6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.72■□□□□ 0.75
Smc1bQ920F6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Gm5587-201ENSMUST00000206270 674 ntBASIC19.72■□□□□ 0.75
Smc1bQ920F6 Gm44771-201ENSMUST00000206975 626 ntBASIC19.72■□□□□ 0.75
Smc1bQ920F6 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.72■□□□□ 0.75
Smc1bQ920F6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc1bQ920F6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc1bQ920F6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.7■□□□□ 0.74
Smc1bQ920F6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.7■□□□□ 0.74
Smc1bQ920F6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc1bQ920F6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms