Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Gm28033-201ENSMUST00000184224 96 ntBASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Gm7791-201ENSMUST00000219066 539 ntBASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgc5Q91XW9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Gm16061-201ENSMUST00000122167 857 ntBASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Gm7370-201ENSMUST00000219471 767 ntBASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgc5Q91XW9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgc5Q91XW9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Gm7638-201ENSMUST00000121348 967 ntBASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Gm21559-201ENSMUST00000220638 855 ntBASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Gm8587-201ENSMUST00000076538 843 ntBASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgc5Q91XW9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhgc5Q91XW9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhgc5Q91XW9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgc5Q91XW9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms