Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SfpqQ8VIJ6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SfpqQ8VIJ6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SfpqQ8VIJ6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.15■□□□□ 0.5
SfpqQ8VIJ6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SfpqQ8VIJ6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.15■□□□□ 0.5
SfpqQ8VIJ6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SfpqQ8VIJ6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SfpqQ8VIJ6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Gm11927-201ENSMUST00000118472 759 ntBASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SfpqQ8VIJ6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SfpqQ8VIJ6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Gm11643-201ENSMUST00000119578 864 ntBASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Gm26524-201ENSMUST00000192339 390 ntBASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SfpqQ8VIJ6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Rab3c-203ENSMUST00000224180 967 ntBASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SfpqQ8VIJ6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SfpqQ8VIJ6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms