Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Gm10849-201ENSMUST00000100397 618 ntBASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdh18Q8VHR0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh18Q8VHR0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh18Q8VHR0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh18Q8VHR0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh18Q8VHR0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdh18Q8VHR0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh18Q8VHR0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdh18Q8VHR0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh18Q8VHR0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Gm7290-201ENSMUST00000104990 617 ntBASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Gm12918-201ENSMUST00000120234 636 ntBASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Gm15710-201ENSMUST00000121821 636 ntBASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Gm5075-201ENSMUST00000196916 622 ntBASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pcdh18Q8VHR0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh18Q8VHR0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms