Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Gm23935-201ENSMUST00000102303 57 ntBASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Gm24270-201ENSMUST00000102326 57 ntBASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Gm24245-201ENSMUST00000157318 57 ntBASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Lmcd1Q8VEE1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Gm13312-201ENSMUST00000119631 718 ntBASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lmcd1Q8VEE1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Mir5126-201ENSMUST00000175513 77 ntBASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lmcd1Q8VEE1 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Psmb5-202ENSMUST00000227257 622 ntBASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Tgds-204ENSMUST00000228543 1594 ntBASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lmcd1Q8VEE1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Gm10576-201ENSMUST00000191927 825 ntBASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lmcd1Q8VEE1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms