Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Gm42545-201ENSMUST00000202755 922 ntBASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps39Q8R5L3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps39Q8R5L3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Vps39Q8R5L3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Vps39Q8R5L3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Gm12382-201ENSMUST00000122005 922 ntBASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps39Q8R5L3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps39Q8R5L3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Gm4974-201ENSMUST00000209974 875 ntBASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps39Q8R5L3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps39Q8R5L3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms