Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup58Q8R332 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup58Q8R332 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.38■□□□□ 0.53
Nup58Q8R332 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Nup58Q8R332 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.38■□□□□ 0.53
Nup58Q8R332 Gm27275-201ENSMUST00000184318 272 ntBASIC18.38■□□□□ 0.53
Nup58Q8R332 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.38■□□□□ 0.53
Nup58Q8R332 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nup58Q8R332 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nup58Q8R332 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nup58Q8R332 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.37■□□□□ 0.53
Nup58Q8R332 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.37■□□□□ 0.53
Nup58Q8R332 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nup58Q8R332 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nup58Q8R332 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup58Q8R332 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup58Q8R332 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nup58Q8R332 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nup58Q8R332 Gm13401-201ENSMUST00000117074 291 ntBASIC18.36■□□□□ 0.53
Nup58Q8R332 Gm11927-201ENSMUST00000118472 759 ntBASIC18.36■□□□□ 0.53
Nup58Q8R332 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nup58Q8R332 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup58Q8R332 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.36■□□□□ 0.53
Nup58Q8R332 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.36■□□□□ 0.53
Nup58Q8R332 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.36■□□□□ 0.53
Nup58Q8R332 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.36■□□□□ 0.53
Nup58Q8R332 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup58Q8R332 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup58Q8R332 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nup58Q8R332 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup58Q8R332 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.35■□□□□ 0.53
Nup58Q8R332 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Gm11643-201ENSMUST00000119578 864 ntBASIC18.35■□□□□ 0.53
Nup58Q8R332 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nup58Q8R332 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup58Q8R332 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nup58Q8R332 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.34■□□□□ 0.53
Nup58Q8R332 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nup58Q8R332 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Nup58Q8R332 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nup58Q8R332 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nup58Q8R332 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nup58Q8R332 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nup58Q8R332 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup58Q8R332 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup58Q8R332 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup58Q8R332 Mir6349-201ENSMUST00000184059 97 ntBASIC18.33■□□□□ 0.52
Nup58Q8R332 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup58Q8R332 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup58Q8R332 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup58Q8R332 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nup58Q8R332 Dio3-201ENSMUST00000097228 1449 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms