Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Gm17661-201ENSMUST00000170317 270 ntBASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Gm12896-201ENSMUST00000118430 226 ntBASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Gm13158-201ENSMUST00000122007 736 ntBASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox30Q8CGW4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Sox30Q8CGW4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox30Q8CGW4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox30Q8CGW4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Gm42545-201ENSMUST00000202755 922 ntBASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.76■□□□□ 0.59
Sox30Q8CGW4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox30Q8CGW4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox30Q8CGW4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Gm37179-201ENSMUST00000194862 823 ntBASIC18.73■□□□□ 0.59
Sox30Q8CGW4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms