Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hist1h2aaQ8CGP4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Gm27011-201ENSMUST00000182352 972 ntBASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist1h2aaQ8CGP4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Gm10812-201ENSMUST00000099864 546 ntBASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hist1h2aaQ8CGP4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hist1h2aaQ8CGP4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Hist1h2aaQ8CGP4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.14■□□□□ 0.18
Hist1h2aaQ8CGP4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hist1h2aaQ8CGP4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hist1h2aaQ8CGP4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms