Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc38Q8CDN8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc38Q8CDN8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.04■□□□□ 0.64
Ccdc38Q8CDN8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Gm24841-201ENSMUST00000158676 357 ntBASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc38Q8CDN8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc38Q8CDN8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ccdc38Q8CDN8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc38Q8CDN8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc38Q8CDN8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc38Q8CDN8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc38Q8CDN8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc38Q8CDN8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Gm9867-201ENSMUST00000192212 2647 ntBASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Gm10698-201ENSMUST00000182663 604 ntBASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms