Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sfr1Q8BP27 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Gm37025-201ENSMUST00000195159 829 ntBASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Sfr1Q8BP27 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sfr1Q8BP27 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.41■□□□□ 0.38
Sfr1Q8BP27 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sfr1Q8BP27 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Gm30025-201ENSMUST00000218555 728 ntBASIC17.4■□□□□ 0.38
Sfr1Q8BP27 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sfr1Q8BP27 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sfr1Q8BP27 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.39■□□□□ 0.37
Sfr1Q8BP27 Gm27463-201ENSMUST00000183569 57 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms