Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim6Q8BGE7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trim6Q8BGE7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Gm13216-201ENSMUST00000117145 591 ntBASIC18.24■□□□□ 0.51
Trim6Q8BGE7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Gm6211-202ENSMUST00000167849 925 ntBASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.24■□□□□ 0.51
Trim6Q8BGE7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Zfp783-201ENSMUST00000095946 670 ntBASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim6Q8BGE7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trim6Q8BGE7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim6Q8BGE7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim6Q8BGE7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Flg-201ENSMUST00000050758 1488 ntBASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Gm44549-201ENSMUST00000208351 577 ntBASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim6Q8BGE7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms