Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk3bQ80YF6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Gm5874-201ENSMUST00000096101 508 ntBASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Upk3bQ80YF6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Upk3bQ80YF6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Upk3bQ80YF6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Gm11643-201ENSMUST00000119578 864 ntBASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Upk3bQ80YF6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.5□□□□□ -0.09
Upk3bQ80YF6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Upk3bQ80YF6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms