Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pif1Q80SX8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.82■□□□□ 0.12
Pif1Q80SX8 Gm29518-201ENSMUST00000190858 372 ntBASIC15.82■□□□□ 0.12
Pif1Q80SX8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pif1Q80SX8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.81■□□□□ 0.12
Pif1Q80SX8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pif1Q80SX8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Gm11355-201ENSMUST00000121120 306 ntBASIC15.8■□□□□ 0.12
Pif1Q80SX8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pif1Q80SX8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.79■□□□□ 0.12
Pif1Q80SX8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.79■□□□□ 0.12
Pif1Q80SX8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pif1Q80SX8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pif1Q80SX8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pif1Q80SX8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.78■□□□□ 0.12
Pif1Q80SX8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms