Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp3Q7TNH6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp3Q7TNH6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp3Q7TNH6 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.84■□□□□ 0.93
Nphp3Q7TNH6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp3Q7TNH6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nphp3Q7TNH6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nphp3Q7TNH6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nphp3Q7TNH6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Nphp3Q7TNH6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Nphp3Q7TNH6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nphp3Q7TNH6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nphp3Q7TNH6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.83■□□□□ 0.92
Nphp3Q7TNH6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nphp3Q7TNH6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Gm10013-201ENSMUST00000106074 672 ntBASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nphp3Q7TNH6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nphp3Q7TNH6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Mir1668-201ENSMUST00000184114 107 ntBASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nphp3Q7TNH6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Gm18101-201ENSMUST00000215769 548 ntBASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms