Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Foxc1Q61572 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Gm43183-201ENSMUST00000200632 547 ntBASIC12.59□□□□□ -0.39
Foxc1Q61572 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.59□□□□□ -0.39
Foxc1Q61572 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.59□□□□□ -0.39
Foxc1Q61572 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Foxc1Q61572 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Foxc1Q61572 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Foxc1Q61572 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Foxc1Q61572 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.59□□□□□ -0.39
Foxc1Q61572 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Foxc1Q61572 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Foxc1Q61572 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Foxc1Q61572 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.58□□□□□ -0.39
Foxc1Q61572 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Foxc1Q61572 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.58□□□□□ -0.4
Foxc1Q61572 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Foxc1Q61572 Gm37292-201ENSMUST00000192062 758 ntBASIC12.58□□□□□ -0.4
Foxc1Q61572 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Foxc1Q61572 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Foxc1Q61572 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Foxc1Q61572 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Foxc1Q61572 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Foxc1Q61572 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.57□□□□□ -0.4
Foxc1Q61572 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.57□□□□□ -0.4
Foxc1Q61572 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Gm29791-202ENSMUST00000207888 369 ntBASIC12.57□□□□□ -0.4
Foxc1Q61572 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.57□□□□□ -0.4
Foxc1Q61572 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.57□□□□□ -0.4
Foxc1Q61572 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.57□□□□□ -0.4
Foxc1Q61572 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Foxc1Q61572 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Foxc1Q61572 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.57□□□□□ -0.4
Foxc1Q61572 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Foxc1Q61572 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Foxc1Q61572 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms