Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.34■□□□□ 0.37
Hif1aQ61221 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hif1aQ61221 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hif1aQ61221 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hif1aQ61221 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hif1aQ61221 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.33■□□□□ 0.37
Hif1aQ61221 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hif1aQ61221 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hif1aQ61221 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hif1aQ61221 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Hif1aQ61221 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.33■□□□□ 0.36
Hif1aQ61221 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.33■□□□□ 0.36
Hif1aQ61221 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hif1aQ61221 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hif1aQ61221 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hif1aQ61221 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hif1aQ61221 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hif1aQ61221 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Hif1aQ61221 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hif1aQ61221 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hif1aQ61221 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hif1aQ61221 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.32■□□□□ 0.36
Hif1aQ61221 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.32■□□□□ 0.36
Hif1aQ61221 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.32■□□□□ 0.36
Hif1aQ61221 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Gm11643-201ENSMUST00000119578 864 ntBASIC17.32■□□□□ 0.36
Hif1aQ61221 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hif1aQ61221 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.32■□□□□ 0.36
Hif1aQ61221 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.32■□□□□ 0.36
Hif1aQ61221 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hif1aQ61221 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Hif1aQ61221 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Hif1aQ61221 Gm12933-201ENSMUST00000120203 872 ntBASIC17.31■□□□□ 0.36
Hif1aQ61221 Mir5133-201ENSMUST00000174955 77 ntBASIC17.31■□□□□ 0.36
Hif1aQ61221 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hif1aQ61221 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Hif1aQ61221 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hif1aQ61221 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.3■□□□□ 0.36
Hif1aQ61221 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hif1aQ61221 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hif1aQ61221 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms