Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h4Q60641 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h4Q60641 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h4Q60641 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h4Q60641 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h4Q60641 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h4Q60641 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Nr1h4Q60641 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h4Q60641 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.37■□□□□ 0.21
Nr1h4Q60641 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h4Q60641 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.37■□□□□ 0.21
Nr1h4Q60641 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h4Q60641 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h4Q60641 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nr1h4Q60641 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h4Q60641 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h4Q60641 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h4Q60641 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h4Q60641 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h4Q60641 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nr1h4Q60641 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nr1h4Q60641 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.36■□□□□ 0.21
Nr1h4Q60641 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nr1h4Q60641 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nr1h4Q60641 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h4Q60641 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Nr1h4Q60641 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Nr1h4Q60641 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h4Q60641 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.35■□□□□ 0.21
Nr1h4Q60641 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h4Q60641 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h4Q60641 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1h4Q60641 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1h4Q60641 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nr1h4Q60641 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nr1h4Q60641 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Nr1h4Q60641 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms