Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pabpn1lQ5XFR0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Pabpn1lQ5XFR0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Smad6-203ENSMUST00000179458 273 ntBASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pabpn1lQ5XFR0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Pabpn1lQ5XFR0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pabpn1lQ5XFR0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pabpn1lQ5XFR0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pabpn1lQ5XFR0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Gm22325-201ENSMUST00000158904 308 ntBASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Gm10493-201ENSMUST00000097270 612 ntBASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pabpn1lQ5XFR0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pabpn1lQ5XFR0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pabpn1lQ5XFR0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms