Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-3Q5R1E6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-3Q5R1E6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Trav6-3Q5R1E6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Gm4974-201ENSMUST00000209974 875 ntBASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav6-3Q5R1E6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-3Q5R1E6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Gm42545-201ENSMUST00000202755 922 ntBASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-3Q5R1E6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms