Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-2Q5R1A4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.19□□□□□ -0.3
Trdv2-2Q5R1A4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trdv2-2Q5R1A4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Dancr-204ENSMUST00000132389 2347 ntBASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-2Q5R1A4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trdv2-2Q5R1A4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-2Q5R1A4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Gm10493-201ENSMUST00000097270 612 ntBASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-2Q5R1A4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms