Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cnga4Q3UW12 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cnga4Q3UW12 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Cnga4Q3UW12 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cnga4Q3UW12 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cnga4Q3UW12 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Gm42778-201ENSMUST00000199644 553 ntBASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cnga4Q3UW12 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Dancr-204ENSMUST00000132389 2347 ntBASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cnga4Q3UW12 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.42■□□□□ 0.38
Cnga4Q3UW12 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cnga4Q3UW12 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.41■□□□□ 0.38
Cnga4Q3UW12 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cnga4Q3UW12 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Cnga4Q3UW12 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnga4Q3UW12 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnga4Q3UW12 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnga4Q3UW12 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms