Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Dio3-201ENSMUST00000097228 1449 ntBASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nhej1Q3KNJ2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nhej1Q3KNJ2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nhej1Q3KNJ2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nhej1Q3KNJ2 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.27■□□□□ 0.52
Nhej1Q3KNJ2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.27■□□□□ 0.52
Nhej1Q3KNJ2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nhej1Q3KNJ2 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.27■□□□□ 0.52
Nhej1Q3KNJ2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nhej1Q3KNJ2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nhej1Q3KNJ2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nhej1Q3KNJ2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nhej1Q3KNJ2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nhej1Q3KNJ2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Nhej1Q3KNJ2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Nhej1Q3KNJ2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms