Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim63Q38HM4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim63Q38HM4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim63Q38HM4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.24□□□□□ -0.13
Trim63Q38HM4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim63Q38HM4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.24□□□□□ -0.13
Trim63Q38HM4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim63Q38HM4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim63Q38HM4 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.23□□□□□ -0.13
Trim63Q38HM4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms